Re: Gsl libraries are not being found, out of ideas?

From: Diego M. Vadell <dvadell_at_linuxclusters.com.ar>
Date: Fri, 21 Nov 2008 13:01:55 -0200

Hi,

   You can try:

* Including, before you launch Gadget, a line like:

ls -l /path/where/you/expect/gsl/lib/libgsl.*

to get more info. Also, you can ldd the library, to see if it somehow needs
other libraries.

* You can try recompiling it setting LD_RUN_PATH with the directory where
libgsl is found, omitting the need to put LD_LIBRARY_PATH

HTH
 -- Diego

On Friday 21 November 2008 11:05:12 Jay Billings wrote:
> Maybe try:
>
> LD_LIBRARY_PATH="gsl path" mpirun -np blah ./Gadget2
>
> ?
>
> Jay
>
> Ralph Rudd wrote:
> > I am trying to run Gadget2 on a e1340 cluster, Linux kernel, ssh shell
> > using OpenMPI and submitting the job via Loadleveler. I am linking to
> > a local installation of GSL, which works during the compile stage and
> > the "ldd Gadget2" command reveals that the Gadget2 executable sees the
> > GSL library. Am also exporting the LD_LIBRARY_PATH variable with the
> > correct library path in my .profile and again in the Loadleveler
> > script. However when I succesfully submit the job, the error output
> > log records the following error about 20 times:
> >
> > /Gadget2: error while loading shared libraries: libgsl.so.0: cannot
> > open shared object file: No such file or directory
> >
> > I am completely stumped. Any help would be appreciated.
> > Thanks in advance
> > RR
>
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Received on 2008-11-21 16:02:06

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