domain decomposition problem

From: Javiera Guedes <javiera_at_ucolick.org>
Date: Mon, 16 Apr 2007 17:18:52 -0700

Hi all,

I'm trying to use Gadget2 to evolve a galaxy with halo, gas, and star
particles. I was running this on a single processor until I got an
account at the Pleiades, a brand new supercomputer at UCSC. I get the
following error:

**********************************************************
This is Gadget, version `2.0'.
 
Running on 8 processors.
 
Allocated 50 MByte communication buffer per processor.
 
Communication buffer has room for 1008246 particles in gravity computation
Communication buffer has room for 409600 particles in density computation
Communication buffer has room for 327680 particles in hydro computation
Communication buffer has room for 304818 particles in domain decomposition
 
 
Hubble (internal units) = 4.13479
G (internal units) = 0.999652
UnitMass_in_g = 6.30712e+48
UnitTime_in_s = 1.27586e+18
UnitVelocity_in_cm_per_s = 6.91e+07
UnitDensity_in_cgs = 9.20417e-30
UnitEnergy_in_cgs = 3.01153e+64
 
Task=0 FFT-Slabs=32
Task=1 FFT-Slabs=32
Task=2 FFT-Slabs=32
Task=3 FFT-Slabs=32
Task=4 FFT-Slabs=32
Task=5 FFT-Slabs=32
Task=6 FFT-Slabs=32
Task=7 FFT-Slabs=32
 
Allocated 8.0625 MByte for FFT kernel(s).
 
 
Allocated 20.0963 MByte for particle storage. 80
 
Allocated 4.09163 MByte for storage of SPH data. 84
 
 
reading file `/home/javiera/ICs/MW1.bh.000.gadget' on task=0 (contains
1404834 particles.)
distributing this file to tasks 0-7
Type 0 (gas): 272409 (tot= 0000272409) masstab=0
Type 1 (halo): 951539 (tot= 0000951539) masstab=0
Type 2 (disk): 0 (tot= 0000000000) masstab=0
Type 3 (bulge): 0 (tot= 0000000000) masstab=0
Type 4 (stars): 180886 (tot= 0000180886) masstab=0
Type 5 (bndry): 0 (tot= 0000000000) masstab=0
 
reading done.
Total number of particles : 0001404834
 
allocated 0.0762939 Mbyte for ngb search.
 
Allocated 15.6342 MByte for BH-tree. 64
 
domain decomposition...
NTopleaves= 834
 
*No domain decomposition that stays within memory bounds is possible.*

**************************************************************

The relevant options on my parameter files are:

% Memory allocation

PartAllocFactor 1.5
TreeAllocFactor 0.8
BufferSize 50 % in MByte


And my makefile options are:
OPT += -DUNEQUALSOFTENINGS
OPT += -DPEANOHILBERT
OPT += -DWALLCLOCK
OPT += -DSYNCHRONIZATION

Any suggestions would be much appreciated.

Thanks,
-- Javiera

-----------------------------------
        Javiera Guedes
   UCSC Astronomy Department
    javiera_at_astro.ucsc.edu
     ph: (831) 459-5722
     fax: (831) 459-5265
-----------------------------------
Received on 2007-04-17 02:18:54

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